All Publications 

     *These researchers contributed equally

* Members of Karasov lab

16 Backman, N., Latorre, S.M.,  Symeonidi, E., Muszyńsk,i A., Bleak, E.,  Eads, L., Martinez-Koury, P., Som, S., Hawks, A., Gloss, A.D., Belnap, D.M., Manuel, A.M., Deutschbauer, A.M., Bergelson, J., Azadi, P., Burbano, H.A* and Karasov, T*., 2024., June 14 A phage-tail-like bacteriocin suppresses competitors in metapopulations of pathogenic bacteria.  Science, 

15 Karasov, T.L., Neumann, M., Shirsekar, G., Monroe, G., PATHODOPSIS Team, Weigel, D. and Schwab, R., 2022., April 10 Drought selection on Arabidopsis populations and their microbiomes.  (In press Nature Microbiology) bioRxiv, 2022.04.08.487684. 

14 Duque-Jaramillo, A., Ulmer, N., Alseekh, S., Bezrukov, I., Fernie, A.R., Skirycz, A., Karasov, T.L. and Weigel, D., 2023., March 20 The genetic and physiological basis of Arabidopsis thaliana tolerance to Pseudomonas viridiflava, New Phytologist, doi:10.1111/nph.19241.

13 Karasov, T.L. and Lundberg, D.S., 2022., August The changing influence of host genetics on the leaf fungal microbiome throughout plant development. PLoS Biology, e3001748.

12 Lundberg, D.S., de Pedro Jové, R., Ayutthaya, P.P.N., Karasov, T.L., Shalev, O., Poersch, K., Ding, W., Bollmann-Giolai, A., Bezrukov, I. and Weigel, D., 2022. Contrasting patterns of microbial dominance in the Arabidopsis thaliana phyllosphere. Proceedings of the National Academy of Sciences, 119:e2211881119.

11 Shalev, O., Karasov, T.L., Lundberg, D.S., Ashkenazy, H., Pramoj Na Ayutthaya, P. and Weigel, D., 2022. Commensal Pseudomonas strains facilitate protective response against pathogens in the host plant. Nature Ecology & Evolution, Nature Publishing Group, 1–14.

10 Machado, H.E., Bergland, A.O., Taylor, R., Tilk, S., Behrman, E., Dyer, K., Fabian, D.K., Flatt, T., González, J., Karasov, T.L., Kim, B., Kozeretska, I., Lazzaro, B.P., Merritt, T.J., Pool, J.E., O’Brien, K., Rajpurohit, S., Roy, P.R., Schaeffer, S.W., Serga, S., Schmidt, P. and Petrov, D.A., 2021. Broad geographic sampling reveals the shared basis and environmental correlates of seasonal adaptation in Drosophila. eLife, 10.

9 Regalado, J., Lundberg, D.S., Deusch, O., Kersten, S., Karasov, T.L., Poersch, K., Shirsekar, G. and Weigel, D., 2020. Combining whole-genome shotgun sequencing and rRNA gene amplicon analyses to improve detection of microbe--microbe interaction networks in plant leaves. The ISME Journal, Nature Publishing Group, 1–15.

8 Karasov, T.L., Shirsekar, G., Schwab, R. and Weigel, D., 2020. What natural variation can teach us about resistance durability. Current opinion in Plant Biology, 56:89–98.

7  Karasov, T.L., Almario, J., Friedemann, C., Ding, W., Giolai, M., Heavens, D., Kersten, S., Lundberg, D.S., Neumann, M., Regalado, J., Neher, R.A., Kemen, E. and Weigel, D., 2018. Arabidopsis thaliana and Pseudomonas Pathogens Exhibit Stable Associations over Evolutionary Timescales. Cell Host & Microbe, 24:168–179.e4.

Featured in Nature Ecology & Evolution: Goss, Erica M., and Sujan Timilsina. 2018. “A Bacterial Epidemic in Wild Plants.” Nature Ecology & Evolution 2 (10): 1529–30.

Featured in Cell Host & Microbe: Willige, Björn C., Joanne Chory, and Marco Bürger. 2018. “Next Generation of Plant-Associated Bacterial Genome Data.” Cell Host & Microbe 24 (1): 10–11.

6 Karasov, T.L., Chae, E., Herman, J.J. and Bergelson, J., 2017. Mechanisms to Mitigate the Trade-Off between Growth and Defense. The Plant Cell, 29:666–680.

12 Karasov, T.L., Barrett, L., Hershberg, R. and Bergelson, J., 2017. Similar levels of gene content variation observed for Pseudomonas syringae populations extracted from single and multiple host species. PloS One,, 12:e0184195.

5 Vetter, M., Karasov, T.L. and Bergelson, J., 2016. Differentiation between MAMP Triggered Defenses in Arabidopsis thaliana. PLoS Genetics, Public Library of Science, 12:e1006068.

4  Karasov, T.L.*, Kniskern, J.M.*, Gao, L., DeYoung, B.J., Ding, J., Dubiella, U., Lastra, R.O., Nallu, S., Roux, F., Innes, R.W., Barrett, L.G., Hudson, R.R. and Bergelson, J., 2014. The long-term maintenance of a resistance polymorphism through diffuse interactions. Nature, 512:436–440.

3 Karasov, T.L., Horton, M.W. and Bergelson, J., 2014. Genomic variability as a driver of plant–pathogen coevolution? Current opinion in Plant Biology, 18:24–30.

2 Karasov, T.*, Messer, P.W.* and Petrov, D.A., 2010. Evidence that adaptation in Drosophila is not limited by mutation at single sites. PLoS Genetics, 6:e1000924.

Featured in PLoS Genetics: Barton, Nick. 2010. “Understanding Adaptation in Large Populations.” PLoS Genetics 6 (6): e1000987.

1 González, J., Karasov, T.L., Messer, P.W. and Petrov, D.A., 2010. Genome-wide patterns of adaptation to temperate environments associated with transposable elements in Drosophila. PLoS Genetics, 6:e1000905.