All Publications 

     *These researchers contributed equally

* Members of Karasov lab

1 Backman, N., Latorre, S.M., Eads, L., Som, S., Belnap, D., Manuel, A.M., Burbano, H.A* and Karasov, T*., 2023., April 17 A weaponized phage suppresses competitors in historical and modern metapopulations of pathogenic bacteria. bioRxiv, 2023.04.17.536465. 

2 Duque-Jaramillo, A., Ulmer, N., Alseekh, S., Bezrukov, I., Fernie, A.R., Skirycz, A., Karasov, T.L. and Weigel, D., 2023., March 20 The genetic and physiological basis of Arabidopsis thaliana tolerance to Pseudomonas viridiflava. bioRxiv, 2023.03.18.533268. 

3 Karasov, T.L. and Lundberg, D.S., 2022., August The changing influence of host genetics on the leaf fungal microbiome throughout plant development. PLoS Biology, e3001748.

4 Lundberg, D.S., de Pedro Jové, R., Ayutthaya, P.P.N., Karasov, T.L., Shalev, O., Poersch, K., Ding, W., Bollmann-Giolai, A., Bezrukov, I. and Weigel, D., 2022. Contrasting patterns of microbial dominance in the Arabidopsis thaliana phyllosphere. Proceedings of the National Academy of Sciences, 119:e2211881119.

5 Karasov, T.L., Neumann, M., Shirsekar, G., Monroe, G., PATHODOPSIS Team, Weigel, D. and Schwab, R., 2022., April 10 Drought selection on Arabidopsis populations and their microbiomes. bioRxiv, 2022.04.08.487684. 

6 Shalev, O., Karasov, T.L., Lundberg, D.S., Ashkenazy, H., Pramoj Na Ayutthaya, P. and Weigel, D., 2022. Commensal Pseudomonas strains facilitate protective response against pathogens in the host plant. Nature Ecology & Evolution, Nature Publishing Group, 1–14.

7 Machado, H.E., Bergland, A.O., Taylor, R., Tilk, S., Behrman, E., Dyer, K., Fabian, D.K., Flatt, T., González, J., Karasov, T.L., Kim, B., Kozeretska, I., Lazzaro, B.P., Merritt, T.J., Pool, J.E., O’Brien, K., Rajpurohit, S., Roy, P.R., Schaeffer, S.W., Serga, S., Schmidt, P. and Petrov, D.A., 2021. Broad geographic sampling reveals the shared basis and environmental correlates of seasonal adaptation in Drosophila. eLife, 10.

8 Regalado, J., Lundberg, D.S., Deusch, O., Kersten, S., Karasov, T.L., Poersch, K., Shirsekar, G. and Weigel, D., 2020. Combining whole-genome shotgun sequencing and rRNA gene amplicon analyses to improve detection of microbe--microbe interaction networks in plant leaves. The ISME Journal, Nature Publishing Group, 1–15.

9 Karasov, T.L., Shirsekar, G., Schwab, R. and Weigel, D., 2020. What natural variation can teach us about resistance durability. Current opinion in Plant Biology, 56:89–98.

10  Karasov, T.L., Almario, J., Friedemann, C., Ding, W., Giolai, M., Heavens, D., Kersten, S., Lundberg, D.S., Neumann, M., Regalado, J., Neher, R.A., Kemen, E. and Weigel, D., 2018. Arabidopsis thaliana and Pseudomonas Pathogens Exhibit Stable Associations over Evolutionary Timescales. Cell Host & Microbe, 24:168–179.e4.

Featured in Nature Ecology & Evolution: Goss, Erica M., and Sujan Timilsina. 2018. “A Bacterial Epidemic in Wild Plants.” Nature Ecology & Evolution 2 (10): 1529–30.

Featured in Cell Host & Microbe: Willige, Björn C., Joanne Chory, and Marco Bürger. 2018. “Next Generation of Plant-Associated Bacterial Genome Data.” Cell Host & Microbe 24 (1): 10–11.

11 Karasov, T.L., Chae, E., Herman, J.J. and Bergelson, J., 2017. Mechanisms to Mitigate the Trade-Off between Growth and Defense. The Plant Cell, 29:666–680.

12 Karasov, T.L., Barrett, L., Hershberg, R. and Bergelson, J., 2017. Similar levels of gene content variation observed for Pseudomonas syringae populations extracted from single and multiple host species. PloS One,, 12:e0184195.

13 Vetter, M., Karasov, T.L. and Bergelson, J., 2016. Differentiation between MAMP Triggered Defenses in Arabidopsis thaliana. PLoS Genetics, Public Library of Science, 12:e1006068.

14  Karasov, T.L.*, Kniskern, J.M.*, Gao, L., DeYoung, B.J., Ding, J., Dubiella, U., Lastra, R.O., Nallu, S., Roux, F., Innes, R.W., Barrett, L.G., Hudson, R.R. and Bergelson, J., 2014. The long-term maintenance of a resistance polymorphism through diffuse interactions. Nature, 512:436–440.

15 Karasov, T.L., Horton, M.W. and Bergelson, J., 2014. Genomic variability as a driver of plant–pathogen coevolution? Current opinion in Plant Biology, 18:24–30.

16 Karasov, T.*, Messer, P.W.* and Petrov, D.A., 2010. Evidence that adaptation in Drosophila is not limited by mutation at single sites. PLoS Genetics, 6:e1000924.

Featured in PLoS Genetics: Barton, Nick. 2010. “Understanding Adaptation in Large Populations.” PLoS Genetics 6 (6): e1000987.

17 González, J., Karasov, T.L., Messer, P.W. and Petrov, D.A., 2010. Genome-wide patterns of adaptation to temperate environments associated with transposable elements in Drosophila. PLoS Genetics, 6:e1000905.